Water Filtration Series: A Guide to Whole-House Filtration for Iron, Manganese & Odor Problems

Water Filtration Series: A Guide to Whole-House Filtration for Iron, Manganese & Odor Problems

TWSB - Clack AIO Filtration black tank cutaway

In the second installment of our Water Filtration Series, we’re diving deep into whole-house filtration systems designed to tackle tough water problems and the best options for removal of: iron, manganese, and hydrogen sulfide (H₂S).

We’ll cover:

 When and how to know you need a whole-house filtration system

 Which type of system works best for the water issues being treated

 Why the right filtration system matters

 How to choose the right system and solution for your water, home, and family

 

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Why Iron, Manganese, H2S (odor), and Low PH are often referred to as "Problem Water"

Water with high levels of iron, manganese, H₂S and low PH is often called problem water — and for good reason. These issues can be stubborn, and solving them often takes trial, error, and expertise.

Many homeowners (and even some “experts”) try to fix these problems with oversized filter cartridges before or after a water softener. Unfortunately, this approach is just a band-aid that rarely lasts more than a few weeks to a few months. Resulting in poor water quality, frequent repairs on water treatment equipment, plumbing fixtures, water heaters, and all water using appliances and, unfortunately, early replacement of water treatment system due to failure. 

A proper solution starts with a professional water analysis. Without it, you risk wasting money on water treatment equipment, appliances, filters that clog quickly, cost a fortune to replace, and failure to deliver truly clean water.


Do you need a Whole-House filtration system?

Here are 8 signs you likely need a whole-house water filtration system:

stained shower from iron and rust in the water

You have a water softener but still have iron staining throughout the house.
You’re using water softener salts like Red Out, Iron Fighter, or System Saver to remove iron.
You rely on additives like Iron Out or Rust Out to clean your water softener.
You’re constantly scrubbing rust or black stains from toilets, sinks, and showers.
Family members need frequent hair treatments to remove iron.
Your laundry comes out with rust stains, discoloration, or spots.
Your hot water or bathwater is consistently discolored.
Your water smells rusty, swampy, musty, has a rotton egg odor.
Plumbing fixtures and appliances are showing signs of rust from your water.

If any of these sound familiar — it’s time to explore a proper whole-house solution.


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Why a thorough water analysis is critical in designing the proper whole house filtration system and using the right filtration media

The Water Softener Blog Professional Water Testing

Tap Score - Well Water Test Kit

Water hardness levels

Iron, manganese, hydrogen sulfide levels and more

PH of the water
Alkalinity of the water
Turbidity levels
Absence or Presence of bacteria (E-Coli), 
Total Organic carbons (Iron Bacteria)
Volatile Organic Chemicals (VOCs)
Total Dissolved Solids (TDS)
Nitrates/Nitrites
Arsenic 
Radium
Sulphates
Sodium
Chlorides
And much more

Low pH of water (below 6.5) makes it difficult for iron and manganese to precipiate out of water and consequently more difficult to remove with typical filtration methods, without PH adjustment and chemical oxidation. PH adjustment may be required to elevate the PH closer to neutral (7) and above before tackling iron, manganese, odor removal and other water chemistry issues.



Whole-House Filtration System Options

Here are the most common whole house filtration systems professionals use to treat problem water — with the pros and cons of each system.

TWSB - Potassium Permanganate Filtration System

1.  Manganese Greensand Filters

  • Uses potassium permanganate or chlorine to regenerate the filter media.

  • Good for moderate levels of iron, manganese, and H₂S.

👍 Pros: Affordable, effective for moderate water problems.

👎 Cons: High maintenance, heavy media, requires strong water pressure & high flow rates to efficiently backwash filter media. Low water flow rates through filtration system. These things are a total mess with spilled potassium permanganate! Take it from my personal experience. 


2.  Chlorine or Hydrogen Peroxide Injection

Chlorine injection system for well water
  • Injects an oxidizer, (Chlorine or Hydrogen Peroxide), to treat iron, manganese, H₂S, and bacteria.

  • Includes a retention tank for contact time and carbon filtration to remove oxidized particulates and residual chemicals.

👍 Pros: Excellent for stubborn iron bacteria and high H₂S levels.

👎 Cons: Complex system, weekly maintenance, potential chlorine/hydrogen peroxide by-products.


3.  Ozonation / Filtration System 
Hellenbrand Storm Ozone Water Filtration System

  • Ozone generator is mounted on the side of the valve and feeds ozone directly into the filtration tank to oxidize iron and odor

  • Adds ozone (pure oxygen) to oxidize contaminants and kill bacteria. Fitler media is backwashed daily

👍 Pros: No chemicals added, effective against bacteria, odors, and iron.

👎 Cons: Short lifespan of ozone, high maintenance, can corrode pipes. Needs to backwash daily to clean media bed. Needs a very dry environment to operate in as ozone generators are very susceptible to damage in damp environments.


4.  Aeration / Filtration Systems - Injects or draws air into the water to oxidize contaminants in well tank and a contact tank, followed by backwashing filter.

➣ Types of Aeration / Filtration Systems:

Venturi Nozzle Aeration / Filtration System: Outdated — can damage well pumps from backpressure, reduce water flow and plug up water lines from injector to filter system. 

Venturi nozzle aeration system

➣ Despite the problems and service issues with venturi nozzle aeration systems there are water treatment and well companies still selling them. Don't buy one!

👍 Pros: Low maintenance, effective for moderate iron & H₂S.

👎 Cons: Will eventually damage submersible well pumps due to high backpressure created by venturi nozzle. Not ideal for very high H₂S or iron bacteria. Plugs water lines with oxidized iron. Short lifespan.


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Two-Tank Aeration / Filtration System: Uses a separate air injection pump, aeration contact tank to oxidize iron and odor, and filtration tank — effective but service-intensive.
Iron Curtain two tank system


👍 Pros: Moderate maintenance, customizable, effective for moderate iron & H₂S.

👎 Cons: Not ideal for very high H₂S or iron bacteria. Requires cleaning of contact tank every two years. Filtration tank needs to be rebed every three years.



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Single-Tank Filtration Systems (Best choice): Simple, low-maintenance, modern control valves, can be set to run on water usage and/or a day overide, options to control air draw, backwash time, rinse. Very customizeable for problem water issues. 1" to 1 1/4" control valve. Can be used for irrigation systems to remove iron on tank sizes up to 16x65 to provide flow rates needed for number of irrigation zones and larger homes requiring higher flow rates.


Clack filter tank cutaway

👍 Pros: Low maintenance, customizable, effective for moderate iron & H₂S.

👎 Cons: Not ideal for very high H₂S or removal of iron bacteria.


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Key Considerations



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Choose a tank size large enough for your water chemistry and household water usage — larger tanks allow longer contact time, better filtration and higher flow rates.

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Ensure your well provides enough flow rate (minimum 5–10 GPM) and pressure (40–70 psi).
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Work with a trusted water treatment professional or educate yourself to DIY the right way.


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Bad water can feel like a losing battle — rusty stains, smelly water, corroding pipes, and endless filter changes. But the right whole-house filtration system, properly selected and installed, can give you clean, great-tasting water for years to come.

Do your research, find an experienced water treatment professional (not just a salesperson), and always start with a detailed water analysis. If you're a DIY person, this guide will help you understand your options and point you toward the best solution to give you great water for your home and family.




I wish you, Good days and Good water!


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